Drug General Information
Drug ID D0L3MP
Drug Name VRX496
Synonyms Nelfinavir; nelfinavir; 159989-64-7; Viracept; Nelfinavir [INN:BAN]; AG1343; UNII-HO3OGH5D7I; AG-1343; C32H45N3O4S; NELFINAVIR MESYLATE AG1343; Viracept (TN); HO3OGH5D7I; CHEBI:7496; AG 1343; NLF; 1UN; 2-[2-HYDROXY-3-(3-HYDROXY-2-METHYL-BENZOYLAMINO)-4-PHENYL SULFANYL-BUTYL]-DECAHYDRO-ISOQUINOLINE-3-CARBOXYLIC ACID TERT-BUTYLAMIDE; (3S-(2(2S*,3S*),3alpha,4abeta,8abeta))-N-(1,1-Dimethylethyl)decahydro-2-(2-hydroxy-3-((3-hydroxy-2-methylbenzoyl)amino)-4-(phenylthio)butyl)-3-isoquinolinecarboxamide; NFV; NFV; Nelfinavir Monomethane Sulfonate; AG1346; Nelfinavir (INN); Nelfinavir [BAN:INN]; AG1343 (*Mesylate salt*); Viracept (TM)(*Mesylate salt*); Met-SDF-1beta & Nelfinavir; Met-Stromal Cell-derived Factor-1beta (Human) & Nelfinavir; (3S,4aS,8aS)-N-tert-butyl-2-[(2R,3R)-2-hydroxy-3-[(3-hydroxy-2-methylbenzoyl)amino]-4-phenylsulfanylbutyl]-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinoline-3-carboxamide
Drug Type Antisense drug
Therapeutic Class Antisense
Company VIRxSYS Corporation
Drug Resistance Mutations
Target Name HIV Protease Target Info
Uniprot ID POL_HV1B1(501-599)
Species Human immunodeficiency virus type 1 (HIV-1)
Reference Sequence PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYD
QILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF [Human immunodeficie
ncy virus type 1 (HIV-1)]
Targeted Disease HIV infection
Drug Resistance Mutations
Mutation info Missense: L90M [1]
Level of Resistance High-level resistance
Mutation info Missense: N88S [2]
Level of Resistance Reduce susceptibility to NFV
Mutation info Missense: D30N [3]
Level of Resistance Confer high-level resistance to NFV
Mutation info Missense: V82A [4]
Level of Resistance Confer reduce susceptibility to NFV
Mutation info Missense: V82F [5]
Level of Resistance Reduce susceptibility to NFV
Mutation info Missense: N88D [2]
Level of Resistance High-level resistance
Mutation info Missense: L24I [6]
Level of Resistance Reduce susceptibility to NFV
Mutation info Missense: G48V [5]
Level of Resistance Confer intermediate-level resistance to NFV
Mutation info Missense: F53L [4], [5], [7]
Level of Resistance Reduce susceptibility to NFV
Mutation info Missense: L10F [8], [9], [10]
Level of Resistance Reduce susceptibility to NFV in vitro
Mutation info Missense: N83D [5], [11], [12]
Level of Resistance Reduce susceptibility to NFV
Mutation info Missense: L89V [4], [13], [14]
Level of Resistance Reduce susceptibility to NFV
Mutation info Missense: G48M [7], [15], [16]
Level of Resistance Intermediate resistance
Mutation info Missense: I54A [17], [18], [19]
Level of Resistance Low-level resistance
Mutation info Missense: L24F [20], [5]
Level of Resistance Reduce susceptibility to NFV
Mutation info Missense: G48A [17], [18]
Level of Resistance Intermediate resistance
Mutation info Missense: G48L [17], [18]
Level of Resistance Intermediate resistance
Mutation info Missense: G48Q [17], [18]
Level of Resistance Intermediate resistance
Mutation info Missense: G48S [17], [18]
Level of Resistance Intermediate resistance
Mutation info Missense: G48T [17], [18]
Level of Resistance Intermediate resistance
Mutation info Missense: G73A [17], [18]
Level of Resistance Low-level resistance
Mutation info Missense: G73C [17], [18]
Level of Resistance Low-level resistance
Mutation info Missense: G73S [17], [18]
Level of Resistance Low-level resistance
Mutation info Missense: G73T [17], [18]
Level of Resistance Low-level resistance
Mutation info Missense: I47A [17], [18]
Level of Resistance Intermediate resistance
Mutation info Missense: I47V [17], [18]
Level of Resistance Low-level resistance
Mutation info Missense: I50V [17], [18]
Level of Resistance Low-level resistance
Mutation info Missense: I54L [17], [19]
Level of Resistance Low-level resistance
Mutation info Missense: I54M [17], [19]
Level of Resistance Low-level resistance
Mutation info Missense: I54S [17], [19]
Level of Resistance Low-level resistance
Mutation info Missense: I54T [17], [19]
Level of Resistance Low-level resistance
Mutation info Missense: I54V [17], [19]
Level of Resistance Low-level resistance
Mutation info Missense: I84A [17], [19]
Level of Resistance High-level resistance
Mutation info Missense: I84C [17], [19]
Level of Resistance High-level resistance
Mutation info Missense: I84V [17], [19]
Level of Resistance High-level resistance
Mutation info Missense: K20T [17], [19]
Level of Resistance Low-level resistance
Mutation info Missense: L33F [17], [19]
Mutation info Missense: M46I [17], [19]
Level of Resistance Intermediate resistance
Mutation info Missense: M46L [17], [19]
Level of Resistance Low-level resistance
Mutation info Missense: M46V [17], [19]
Level of Resistance Low-level resistance
Mutation info Missense: N88G [17], [19]
Level of Resistance Intermediate resistance
Mutation info Missense: N88T [17], [19]
Level of Resistance Intermediate resistance
Mutation info Missense: T74P [17], [19]
Level of Resistance Low-level resistance
Mutation info Missense: V32I [17], [19]
Level of Resistance Low-level resistance
Mutation info Missense: V82C [17], [19]
Level of Resistance Intermediate resistance
Mutation info Missense: V82M [17], [19]
Level of Resistance Intermediate resistance
Mutation info Missense: V82S [17], [19]
Level of Resistance Intermediate resistance
Mutation info Missense: V82T [17], [19]
Level of Resistance Intermediate resistance
Mutation info Missense: L23I [21]
Level of Resistance Confer low/intermediate-level resistance to NFV
Mutation info Missense: L90M [22]
Mutation Frequency 1 out of 31 samples
Mutation info Missense: K65R [23]
Mutation Frequency 7 out of 37 samples
References
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REF 2 Genotypic and phenotypic characterization of human immunodeficiency virus type 1 variants isolated from patients treated with the protease inhibitor nelfinavir. Antimicrob Agents Chemother. 1998 Oct;42(10):2637-44.
REF 3 Postpartum antiretroviral drug resistance in HIV-1-infected women receiving pregnancy-limited antiretroviral therapy. AIDS. 2010 Jan 2;24(1):45-53.
REF 4 Human immunodeficiency virus reverse transcriptase and protease sequence database. Nucleic Acids Res. 2003 Jan 1;31(1):298-303.
REF 5 HIV-1 protease mutations and protease inhibitor cross-resistance. Antimicrob Agents Chemother. 2010 Oct;54(10):4253-61.
REF 6 Genetic correlates of in vivo viral resistance to indinavir, a human immunodeficiency virus type 1 protease inhibitor. J Virol. 1996 Dec;70(12):8270-6.
REF 7 Prediction of HIV-1 drug susceptibility phenotype from the viral genotype using linear regression modeling. J Virol Methods. 2007 Oct;145(1):47-55.
REF 8 Broad antiretroviral activity and resistance profile of the novel human immunodeficiency virus integrase inhibitor elvitegravir (JTK-303/GS-9137). J Virol. 2008 Jan;82(2):764-74.
REF 9 Selection of diverse and clinically relevant integrase inhibitor-resistant human immunodeficiency virus type 1 mutants. Antiviral Res. 2008 Nov;80(2):213-22.
REF 10 Resistance mutations in human immunodeficiency virus type 1 integrase selected with elvitegravir confer reduced susceptibility to a wide range of integrase inhibitors. J Virol. 2008 Nov;82(21):10366-74.
REF 11 Genotypic changes in human immunodeficiency virus type 1 protease associated with reduced susceptibility and virologic response to the protease inh... J Virol. 2006 Nov;80(21):10794-801.
REF 12 Improving the prediction of virological response to tipranavir: the development and validation of a tipranavir-weighted mutation score. Antivir Ther. 2010;15(7):1011-9.
REF 13 Factors associated with the selection of mutations conferring resistance to protease inhibitors (PIs) in PI-experienced patients displaying treatme... Antimicrob Agents Chemother. 2008 Feb;52(2):491-6.
REF 14 Pattern and impact of emerging resistance mutations in treatment experienced patients failing darunavir-containing regimen. AIDS. 2008 Sep 12;22(14):1809-13.
REF 15 Improving lopinavir genotype algorithm through phenotype correlations: novel mutation patterns and amprenavir cross-resistance. AIDS. 2003 May 2;17(7):955-61.
REF 16 HIV-1 subtype B protease and reverse transcriptase amino acid covariation. PLoS Comput Biol. 2007 May;3(5):e87.
REF 17 The HIVdb system for HIV-1 genotypic resistance interpretation. Intervirology. 2012;55(2):98-101.
REF 18 Tackling the problem of HIV drug resistance. Postepy Biochem. 2016;62(3):273-279.
REF 19 How to win the HIV-1 drug resistance hurdle race: running faster or jumping higher Biochem J. 2017 Apr 26;474(10):1559-1577.
REF 20 Nonpolymorphic human immunodeficiency virus type 1 protease and reverse transcriptase treatment-selected mutations. Antimicrob Agents Chemother. 2009 Nov;53(11):4869-78.
REF 21 Association of a novel human immunodeficiency virus type 1 protease substrate cleft mutation, L23I, with protease inhibitor therapy and in vitro drug resistance. Antimicrob Agents Chemother. 2004 Dec;48(12):4864-8.
REF 22 HIV-1 drug-resistance surveillance among treatment-experienced and -nae patients after the implementation of antiretroviral therapy in Ghana. PLoS One. 2013 Aug 19;8(8):e71972.
REF 23 Prevalence and dynamics of the K65R drug resistance mutation in HIV-1-infected infants exposed to maternal therapy with lamivudine, zidovudine and either nevirapine or nelfinavir in breast milk. J Antimicrob Chemother. 2016 Jun;71(6):1619-26.

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