Target Binding Site Detail
Target General Information | Top | ||||
---|---|---|---|---|---|
Target ID | T65200 | Target Info | |||
Target Name | Corticosteroid 11-beta-dehydrogenase 1 (HSD11B1) | ||||
Synonyms | HSD11B1; 11beta-HSD1A; 11HSD1; 11-beta-hydroxysteroid dehydrogenase 1; 11-beta-HSD1; 11-DH; 11 beta-hydroxysteroid dehydrogenase type 1 | ||||
Target Type | Clinical trial Target | ||||
Gene Name | HSD11B1 | ||||
Biochemical Class | Short-chain dehydrogenases reductase | ||||
UniProt ID |
Ligand General Information | Top | ||||
---|---|---|---|---|---|
Ligand Name | NADPH | Ligand Info | |||
Canonical SMILES | C1C=CN(C=C1C(=O)N)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OCC3C(C(C(O3)N4C=NC5=C(N=CN=C54)N)OP(=O)(O)O)O)O)O | ||||
InChI | 1S/C21H30N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1,3-4,7-8,10-11,13-16,20-21,29-31H,2,5-6H2,(H2,23,32)(H,36,37)(H,38,39)(H2,22,24,25)(H2,33,34,35)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1 | ||||
InChIKey | ACFIXJIJDZMPPO-NNYOXOHSSA-N | ||||
PubChem Compound ID | 5884 |
Drug Binding Sites of Target | Top | |||||
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PDB ID: 1XU9 Crystal Structure of the Interface Closed Conformation of 11b-hydroxysteroid dehydrogenase isozyme 1 | ||||||
Method | X-ray diffraction | Resolution | 1.55 Å | Mutation | Yes | [1] |
PDB Sequence |
QPLNEEFRPE
30 MLQGKKVIVT40 GASKGIGREM50 AYHLAKMGAH60 VVVTARSKET70 LQKVVSHCLE 80 LGAASAHYIA90 GTMEDMTFAE100 QFVAQAGKLM110 GGLDMLILNH120 ITNTSLNLFH 130 DDIHHVRKSM140 EVNFLSYVVL150 TVAALPMLKQ160 SNGSIVVVSS170 LAGKVAYPMV 180 AAYSASKFAL190 DGFFSSIRKE200 YSVSRVNVSI210 TLCVLGLIDT220 ETAMKAVSGI 230 VHMQAAPKEE240 CALEIIKGGA250 LRQEEVYYDS260 SLWTTLLIRN270 PSRKILEFLY 280 STSYNMDRF
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|
GLY41
3.195
ALA42
3.598
SER43
2.728
LYS44
3.637
GLY45
3.325
ILE46
2.859
GLY47
4.478
THR64
4.905
ALA65
3.533
ARG66
2.836
SER67
3.286
THR70
4.541
GLY91
3.817
THR92
3.120
MET93
2.923
GLU94
4.133
ASN119
2.816
HIS120
3.731
|
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PDB ID: 1XU7 Crystal Structure of the Interface Open Conformation of Tetrameric 11b-HSD1 | ||||||
Method | X-ray diffraction | Resolution | 1.80 Å | Mutation | Yes | [1] |
PDB Sequence |
QPLNEEFRPE
30 MLQGKKVIVT40 GASKGIGREM50 AYHLAKMGAH60 VVVTARSKET70 LQKVVSHCLE 80 LGAASAHYIA90 GTMEDMTFAE100 QFVAQAGKLM110 GGLDMLILNH120 ITNTSLNLFH 130 DDIHHVRKSM140 EVNFLSYVVL150 TVAALPMLKQ160 SNGSIVVVSS170 LAGKVAYPMV 180 AAYSASKFAL190 DGFFSSIRKE200 YSVSRVNVSI210 TLCVLGLIDT220 ETAMKAVSGI 230 VHMQAAPKEE240 CALEIIKGGA250 LRQEEVYYDS260 SLWTTLLIRN270 PSRKILEFLY 280 STS
|
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|
GLY41
3.292
ALA42
3.750
SER43
2.643
LYS44
3.569
GLY45
3.343
ILE46
2.876
GLY47
4.511
ALA65
3.412
ARG66
2.797
SER67
3.252
THR70
4.484
GLY91
3.780
THR92
3.034
MET93
2.816
GLU94
3.884
ASN119
2.707
HIS120
3.649
ILE121
2.978
|
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PDB ID: 4K1L 4,4-Dioxo-5,6-dihydro-[1,4,3]oxathiazines, a novel class of 11 beta-HSD1 inhibitors for the treatment of diabetes | ||||||
Method | X-ray diffraction | Resolution | 1.96 Å | Mutation | Yes | [2] |
PDB Sequence |
QPLNEEFRPE
30 MLQGKKVIVT40 GASKGIGREM50 AYHLAKMGAH60 VVVTARSKET70 LQKVVSHCLE 80 LGAASAHYIA90 GTMEDMTFAE100 QFVAQAGKLM110 GGLDMLILNH120 ITNTSLNLFH 130 DDIHHVRKSM140 EVNFLSYVVL150 TVAALPMLKQ160 SNGSIVVVSS170 LAGKVAYPMV 180 AAYSASKFAL190 DGFFSSIRKE200 YSVSRVNVSI210 TLCVLGLIDT220 ETAMKAVSGI 230 VHMQAAPKEE240 CALEIIKGGA250 LRQEEVYYDS260 SLWTTLLIRN270 PSRKILEFLY 280 STS
|
|||||
|
GLY41
3.144
ALA42
3.723
SER43
2.832
LYS44
3.428
GLY45
3.474
ILE46
2.970
GLY47
4.542
ALA65
3.699
ARG66
2.806
SER67
2.587
THR70
4.782
GLY91
3.877
THR92
3.036
MET93
2.762
GLU94
3.949
ASN119
2.698
HIS120
3.623
|
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PDB ID: 4HX5 Crystal structure of 11 beta-HSD1 in complex with SAR184841 | ||||||
Method | X-ray diffraction | Resolution | 2.19 Å | Mutation | Yes | [3] |
PDB Sequence |
EEFRPEMLQG
34 KKVIVTGASK44 GIGREMAYHL54 AKMGAHVVVT64 ARSKETLQKV74 VSHCLELGAA 84 SAHYIAGTME94 DMTFAEQFVA104 QAGKLMGGLD114 MLILNHITNT124 SLNLFHDDIH 134 HVRKSMEVNF144 LSYVVLTVAA154 LPMLKQSNGS164 IVVVSSLAGK174 VAYPMVAAYS 184 ASKFALDGFF194 SSIRKEYSVS204 RVNVSITLCV214 LGLIDTETAM224 KAVSGIVHMQ 234 AAPKEECALE244 IIKGGALRQE254 EVYYDSSLWT264 TLLIRNPSRK274 ILEFLYSTSY 284 N
|
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Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .NDP or .NDP2 or .NDP3 or :3NDP;style chemicals stick;color identity;select .A:41 or .A:42 or .A:43 or .A:44 or .A:45 or .A:46 or .A:47 or .A:65 or .A:66 or .A:67 or .A:70 or .A:91 or .A:92 or .A:93 or .A:94 or .A:119 or .A:120 or .A:121 or .A:122 or .A:123 or .A:142 or .A:147 or .A:168 or .A:169 or .A:170 or .A:171 or .A:183 or .A:187 or .A:215 or .A:216 or .A:217 or .A:218 or .A:220 or .A:222 or .A:223; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
GLY41
3.174
ALA42
3.713
SER43
2.701
LYS44
3.671
GLY45
3.351
ILE46
2.903
GLY47
4.447
ALA65
3.500
ARG66
2.761
SER67
2.616
THR70
4.663
GLY91
3.842
THR92
3.128
MET93
2.886
GLU94
4.094
ASN119
2.702
HIS120
3.753
ILE121
3.020
|
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PDB ID: 3QQP Crystal Structure of 11beta-Hydroxysteroid Dehydrogenase 1 (11b-HSD1) in Complex with Urea Inhibitor | ||||||
Method | X-ray diffraction | Resolution | 2.72 Å | Mutation | Yes | [4] |
PDB Sequence |
QQPLNEEFRP
29 EMLQGKKVIV39 TGASKGIGRE49 MAYHLAKMGA59 HVVVTARSKE69 TLQKVVSHCL 79 ELGAASAHYI89 AGTMEDMTFA99 EQFVAQAGKL109 MGGLDMLILN119 HITNTSLNLF 129 HDDIHHVRKS139 MEVNFLSYVV149 LTVAALPMLK159 QSNGSIVVVS169 SLAGKVAYPM 179 VAAYSASKFA189 LDGFFSSIRK199 EYSVSRVNVS209 ITLCVLGLID219 TETAMKAVSG 229 IVHMQAAPKE239 ECALEIIKGG249 ALRQEEVYYD259 SSLWTTLLIR269 NPSRKILEFL 279 YSTSYNMDRF289
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Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .NDP or .NDP2 or .NDP3 or :3NDP;style chemicals stick;color identity;select .A:41 or .A:42 or .A:43 or .A:44 or .A:45 or .A:46 or .A:47 or .A:64 or .A:65 or .A:66 or .A:67 or .A:70 or .A:91 or .A:92 or .A:93 or .A:94 or .A:119 or .A:120 or .A:121 or .A:122 or .A:123 or .A:142 or .A:147 or .A:168 or .A:169 or .A:170 or .A:183 or .A:187 or .A:215 or .A:216 or .A:217 or .A:218 or .A:220 or .A:222 or .A:223; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
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GLY41
3.189
ALA42
3.604
SER43
2.893
LYS44
3.376
GLY45
3.221
ILE46
2.689
GLY47
4.469
THR64
4.932
ALA65
3.507
ARG66
2.709
SER67
3.179
THR70
4.514
GLY91
4.074
THR92
3.186
MET93
2.867
GLU94
4.140
ASN119
2.650
HIS120
3.732
|
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PDB ID: 2RBE The discovery of 2-anilinothiazolones as 11beta-HSD1 inhibitors | ||||||
Method | X-ray diffraction | Resolution | 1.90 Å | Mutation | Yes | [5] |
PDB Sequence |
EEFRPEMLQG
34 KKVIVTGASK44 GIGREMAYHL54 AKMGAHVVVT64 ARSKETLQKV74 VSHCLELGAA 84 SAHYIAGTME94 DMTFAEQFVA104 QAGKLMGGLD114 MLILNHITNT124 SLNLFHDDIH 134 HVRKSMEVNF144 LSYVVLTVAA154 LPMLKQSNGS164 IVVVSSLAGK174 VAYPMVAAYS 184 ASKFALDGFF194 SSIRKEYSVS204 RVNVSITLCV214 LGLIDTETAM224 KAVSGIVHMQ 234 AAPKEECALE244 IIKGGALRQE254 EVYYDSSLWT264 TLLIRNPSRK274 ILEFLYSTY |
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Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .NDP or .NDP2 or .NDP3 or :3NDP;style chemicals stick;color identity;select .A:41 or .A:42 or .A:43 or .A:44 or .A:45 or .A:46 or .A:47 or .A:65 or .A:66 or .A:67 or .A:70 or .A:91 or .A:92 or .A:93 or .A:94 or .A:119 or .A:120 or .A:121 or .A:122 or .A:123 or .A:142 or .A:147 or .A:168 or .A:169 or .A:170 or .A:183 or .A:187 or .A:215 or .A:216 or .A:217 or .A:218 or .A:220 or .A:222 or .A:223; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
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GLY41
3.210
ALA42
3.705
SER43
2.658
LYS44
3.549
GLY45
3.390
ILE46
2.876
GLY47
4.453
ALA65
3.528
ARG66
2.755
SER67
2.642
THR70
4.769
GLY91
3.775
THR92
3.186
MET93
3.562
GLU94
3.718
ASN119
2.660
HIS120
3.975
|
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PDB ID: 3BYZ 2-Amino-1,3-thiazol-4(5H)-ones as Potent and Selective 11-Hydroxysteroid Dehydrogenase Type 1 Inhibitors | ||||||
Method | X-ray diffraction | Resolution | 2.69 Å | Mutation | Yes | [6] |
PDB Sequence |
EEFRPEMLQG
34 KKVIVTGASK44 GIGREMAYHL54 AKMGAHVVVT64 ARSKETLQKV74 VSHCLELGAA 84 SAHYIAGTME94 DMTFAEQFVA104 QAGKLMGGLD114 MLILNHITNT124 SLNLFHDDIH 134 HVRKSMEVNF144 LSYVVLTVAA154 LPMLKQSNGS164 IVVVSSLAGK174 VAYPMVAAYS 184 ASKFALDGFF194 SSIRKEYSVS204 RVNVSITLCV214 LGLIDTETAM224 KAVSGIVHMQ 234 AAPKEECALE244 IIKGGALRQE254 EVYYDSSLWT264 TLLIRNPSRK274 ILEFLYST |
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Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .NDP or .NDP2 or .NDP3 or :3NDP;style chemicals stick;color identity;select .A:41 or .A:42 or .A:43 or .A:44 or .A:45 or .A:46 or .A:47 or .A:65 or .A:66 or .A:67 or .A:70 or .A:91 or .A:92 or .A:93 or .A:94 or .A:119 or .A:120 or .A:121 or .A:122 or .A:123 or .A:142 or .A:147 or .A:168 or .A:169 or .A:170 or .A:183 or .A:187 or .A:215 or .A:216 or .A:217 or .A:218 or .A:220 or .A:222 or .A:223; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
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GLY41
3.098
ALA42
3.585
SER43
2.968
LYS44
3.063
GLY45
3.341
ILE46
2.878
GLY47
4.292
ALA65
3.380
ARG66
2.409
SER67
2.481
THR70
4.549
GLY91
3.966
THR92
3.187
MET93
3.024
GLU94
4.161
ASN119
2.881
HIS120
3.962
|
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PDB ID: 3EY4 Further studies with the 2-amino-1,3-thiazol-4(5H)-one class of 11-hydroxysteroid dehydrogenase type 1 (11-HSD1) inhibitors: Reducing pregnane X receptor (PXR) activity and exploring activity in a monkey pharmacodynamic model | ||||||
Method | X-ray diffraction | Resolution | 3.00 Å | Mutation | Yes | [7] |
PDB Sequence |
EEFRPEMLQG
34 KKVIVTGASK44 GIGREMAYHL54 AKMGAHVVVT64 ARSKETLQKV74 VSHCLELGAA 84 SAHYIAGTME94 DMTFAEQFVA104 QAGKLMGGLD114 MLILNHITNT124 SLNLFHDDIH 134 HVRKSMEVNF144 LSYVVLTVAA154 LPMLKQSNGS164 IVVVSSLAGK174 VAYPMVAAYS 184 ASKFALDGFF194 SSIRKEYSVS204 RVNVSITLCV214 LGLIDTETAM224 KAVSGIVHMQ 234 AAPKEECALE244 IIKGGALRQE254 EVYYDSSLWT264 TLLIRNPSRK274 ILEFLYSTS |
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Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .NDP or .NDP2 or .NDP3 or :3NDP;style chemicals stick;color identity;select .A:41 or .A:42 or .A:43 or .A:44 or .A:45 or .A:46 or .A:47 or .A:64 or .A:65 or .A:66 or .A:67 or .A:91 or .A:92 or .A:93 or .A:94 or .A:119 or .A:120 or .A:121 or .A:122 or .A:123 or .A:142 or .A:147 or .A:168 or .A:169 or .A:170 or .A:171 or .A:183 or .A:187 or .A:215 or .A:216 or .A:217 or .A:218 or .A:220 or .A:222 or .A:223; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
GLY41
3.213
ALA42
3.855
SER43
2.822
LYS44
2.860
GLY45
3.520
ILE46
2.899
GLY47
3.736
THR64
4.688
ALA65
3.542
ARG66
2.686
SER67
2.585
GLY91
3.624
THR92
3.078
MET93
3.034
GLU94
4.527
ASN119
3.135
HIS120
3.812
ILE121
3.171
|
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PDB ID: 4P38 Human 11beta-Hydroxysteroid Dehydrogenase Type 1 in complex with AZD8329 | ||||||
Method | X-ray diffraction | Resolution | 2.80 Å | Mutation | No | [8] |
PDB Sequence |
EFRPEMLQGK
35 KVIVTGASKG45 IGREMAYHLA55 KMGAHVVVTA65 RSKETLQKVV75 SHCLELGAAS 85 AHYIAGTMED95 MTFAEQFVAQ105 AGKLMGGLDM115 LILNHITNTS125 LNLFHDDIHH 135 VRKSMEVNFL145 SYVVLTVAAL155 PMLKQSNGSI165 VVVSSLAGKV175 AYPLVAAYSA 185 SKFALDGFFS195 SIRKEYSVSR205 VNVSITLCVL215 GLIDTETAMK225 AVSGIVHMQA 235 APKEECALEI245 IKGGALRQEE255 VYYDSSRWTT265 LLIRNPSRKI275 LEELYSTSYN 285 WDRFI
|
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Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .NDP or .NDP2 or .NDP3 or :3NDP;style chemicals stick;color identity;select .A:41 or .A:42 or .A:43 or .A:44 or .A:45 or .A:46 or .A:47 or .A:64 or .A:65 or .A:66 or .A:67 or .A:70 or .A:91 or .A:92 or .A:93 or .A:94 or .A:119 or .A:120 or .A:121 or .A:122 or .A:123 or .A:142 or .A:147 or .A:168 or .A:169 or .A:170 or .A:183 or .A:187 or .A:215 or .A:216 or .A:217 or .A:218 or .A:220 or .A:222 or .A:223; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
GLY41
3.246
ALA42
3.607
SER43
2.703
LYS44
3.282
GLY45
3.339
ILE46
2.773
GLY47
4.428
THR64
4.704
ALA65
3.377
ARG66
2.546
SER67
2.891
THR70
4.461
GLY91
3.800
THR92
3.368
MET93
2.973
GLU94
4.156
ASN119
2.623
HIS120
3.900
|
References | Top | ||||
---|---|---|---|---|---|
REF 1 | Conformational flexibility in crystal structures of human 11beta-hydroxysteroid dehydrogenase type I provide insights into glucocorticoid interconversion and enzyme regulation. J Biol Chem. 2005 Feb 11;280(6):4639-48. | ||||
REF 2 | 1,1-Dioxo-5,6-dihydro-[4,1,2]oxathiazines, a novel class of 11?-HSD1 inhibitors for the treatment of diabetes. Bioorg Med Chem Lett. 2013 Aug 15;23(16):4685-91. | ||||
REF 3 | Discovery of SAR184841, a potent and long-lasting inhibitor of 11-hydroxysteroid dehydrogenase type 1, active in a physiopathological animal model of T2D. Bioorg Med Chem Lett. 2013 Apr 15;23(8):2414-21. | ||||
REF 4 | Pyrrolidine-pyrazole ureas as potent and selective inhibitors of 11beta-hydroxysteroid-dehydrogenase type 1. Bioorg Med Chem Lett. 2011 Apr 15;21(8):2244-51. | ||||
REF 5 | The discovery of 2-anilinothiazolones as 11beta-HSD1 inhibitors. Bioorg Med Chem Lett. 2007 Nov 15;17(22):6056-61. | ||||
REF 6 | 2-amino-1,3-thiazol-4(5H)-ones as potent and selective 11beta-hydroxysteroid dehydrogenase type 1 inhibitors: enzyme-ligand co-crystal structure an... J Med Chem. 2008 May 22;51(10):2933-43. | ||||
REF 7 | Further studies with the 2-amino-1,3-thiazol-4(5H)-one class of 11-hydroxysteroid dehydrogenase type 1 (11-HSD1) inhibitors: Reducing pregnane X receptor (PXR) activity and exploring activity in a monkey pharmacodynamic model | ||||
REF 8 | Novel acidic 11-hydroxysteroid dehydrogenase type 1 (11-HSD1) inhibitor with reduced acyl glucuronide liability: the discovery of 4-[4-(2-adamantylcarbamoyl)-5-tert-butyl-pyrazol-1-yl]benzoic acid (AZD8329). J Med Chem. 2012 Nov 26;55(22):10136-47. |
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