Target Binding Site Detail

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Target General Information
Ligand General Information
Drug Binding Sites of Target
References
Target General Information  Top
Target ID T43332 Target Info
Target Name Coagulation factor VII (F7)
Synonyms Serum prothrombin conversion accelerator; SPCA; Proconvertin; Eptacog alfa
Target Type Successful Target
Gene Name F7
Biochemical Class Peptidase
UniProt ID
FA7_HUMAN
Ligand General Information  Top
Ligand Name L-Methionine (S)-S-oxide Ligand Info
Canonical SMILES CS(=O)CCC(C(=O)O)N
InChI 1S/C5H11NO3S/c1-10(9)3-2-4(6)5(7)8/h4H,2-3,6H2,1H3,(H,7,8)/t4-,10-/m0/s1
InChIKey QEFRNWWLZKMPFJ-MFXDVPHUSA-N
PubChem Compound ID 10909908
Drug Binding Sites of Target  Top
PDB ID: 5PB1      Crystal Structure of Factor VIIa in complex with benzenecarboximidamide
Method X-ray diffraction Resolution 1.90 Å Mutation No [1]
PDB Sequence
IVGGKVCPKG
222
ECPWQVLLLV
232
NGAQLCGGTL
242
INTIWVVSAA
252
HCFDKIKNWR
262

NLIAVLGEHD
272
LSEHDGDEQS
282
RRVAQVIIPS
292
TYVPGTTNHD
302
IALLRLHQPV
312

VLTDHVVPLC
322
LPERTFSERT
332
LAFVRFSLVS
342
GWGQLLDRGA
352
TALELVLNVP
363

RLMTQDCLQQ
373
SRSPNITEYM
387
FCAGYSDGSK
397
DSCKGDSGGP
407
HATHYRGTWY
417

LTGIVSWGQG
427
CATVGHFGVY
437
TRVSQYIEWL
447
QKLMRSEPRP
457
GVLLRAPFP
Residue
Distance (Å)
ILE213
3.766
GLY216
4.109
LYS217
3.242
VAL218
3.711
CYS219
4.116
VAL341
4.140
SER342
3.158
Residue
Distance (Å)
GLY343
3.045
LEU347
3.780
ALA354
3.747
GLU356
3.329
LEU357
1.326
VAL359
1.330
LEU360
4.590
PDB ID: 5PAB      Crystal Structure of Factor VIIa in complex with 1-[[3-[2-hydroxy-3-(1H-pyrrolo[3,2-c]pyridin-2-yl)phenyl]phenyl]methyl]-3-phenylurea
Method X-ray diffraction Resolution 1.99 Å Mutation No [2]
PDB Sequence
IVGGKVCPKG
10
ECPWQVLLLV
20
NGAQLCGGTL
30
INTIWVVSAA
40
HCFDKIKNWR
50

NLIAVLGEHD
60
LSEHDGDEQS
70
RRVAQVIIPS
80
TYVPGTTNHD
90
IALLRLHQPV
100

VLTDHVVPLC
110
LPERTFSERT
120
LAFVRFSLVS
130
GWGQLLDRGA
140
TALELVLNVP
151

RLMTQDCLQQ
161
SRNITEYMFC
177
AGYSDGSKDS
187
CKGDSGGPHA
197
THYRGTWYLT
207

GIVSWGQGCA
217
TVGHFGVYTR
227
VSQYIEWLQK
237
LMRSEPRPGV
247
LLRAPFP
Residue
Distance (Å)
ILE1
3.700
GLY4
3.863
LYS5
3.129
VAL6
3.462
CYS7
4.023
VAL129
4.099
SER130
3.123
Residue
Distance (Å)
GLY131
2.982
LEU135
3.973
ALA142
3.775
GLU144
3.275
LEU145
1.333
VAL147
1.327
LEU148
4.570
References  Top
REF 1 Crystal Structure of a Factor VIIa complex
REF 2 Crystal Structure of a Factor VIIa complex

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