Target Information
Target General Information | Top | |||||
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Target ID |
T80896
(Former ID: TTDS00250)
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Target Name |
Estrogen receptor beta (ESR2)
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Synonyms |
Oestrogen receptor beta; Nuclear receptor subfamily 3 group A member 2; NR3A2; Erbeta; ESTRB; ER-beta; Beta-1
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Gene Name |
ESR2
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Target Type |
Successful target
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[1] | ||||
Disease | [+] 4 Target-related Diseases | + | ||||
1 | Breast cancer [ICD-11: 2C60-2C6Y] | |||||
2 | Cushing syndrome [ICD-11: 5A70] | |||||
3 | Menopausal disorder [ICD-11: GA30] | |||||
4 | Vasomotor/allergic rhinitis [ICD-11: CA08] | |||||
Function |
Binds estrogens with an affinity similar to that of ESR1, and activates expression of reporter genes containing estrogen response elements (ERE) in an estrogen-dependent manner. Isoform beta-cx lacks ligand binding ability and has no or only very low ere binding activity resulting in the loss of ligand-dependent transactivation ability. DNA-binding by ESR1 and ESR2 is rapidly lost at 37 degrees Celsius in the absence of ligand while in the presence of 17 beta-estradiol and 4-hydroxy-tamoxifen loss in DNA-binding at elevated temperature is more gradual. Nuclear hormone receptor.
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BioChemical Class |
Nuclear hormone receptor
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UniProt ID | ||||||
Sequence |
MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMK CKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ Click to Show/Hide
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3D Structure | Click to Show 3D Structure of This Target | AlphaFold | ||||
HIT2.0 ID | T05O6O |
Drugs and Modes of Action | Top | |||||
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Approved Drug(s) | [+] 4 Approved Drugs | + | ||||
1 | ARZOXIFENE | Drug Info | Approved | Breast cancer | [2], [3] | |
2 | Conjugated Estrogens | Drug Info | Approved | Menopause symptom | [4] | |
3 | Estrogen | Drug Info | Approved | Menopause symptom | [5] | |
4 | Trilostane | Drug Info | Approved | Cushing disease | [6], [7] | |
Clinical Trial Drug(s) | [+] 8 Clinical Trial Drugs | + | ||||
1 | MF-101 | Drug Info | Phase 3 | Hepatitis virus infection | [8] | |
2 | Premarin/Pravachol | Drug Info | Phase 3 | Hyperlipidaemia | [9] | |
3 | Genistein | Drug Info | Phase 2/3 | Menopause symptom | [10] | |
4 | AUS-131 | Drug Info | Phase 2 | Hot flushes | [11] | |
5 | ERB-041 | Drug Info | Phase 2 | Inflammatory bowel disease | [12], [13] | |
6 | Erteberel | Drug Info | Phase 2 | Prostate hyperplasia | [14] | |
7 | VG-101 | Drug Info | Phase 1/2 | Menopause symptom | [15] | |
8 | ERB-257 | Drug Info | Phase 1 | Sepsis | [16] | |
Discontinued Drug(s) | [+] 8 Discontinued Drugs | + | ||||
1 | BITHIONOL | Drug Info | Withdrawn from market | Trematode infection | [5], [17] | |
2 | HEXESTROL | Drug Info | Withdrawn from market | Irregularities | [18], [19], [20] | |
3 | EM-800 | Drug Info | Discontinued in Phase 3 | Estrogen deficiency | [21] | |
4 | ERA-923 | Drug Info | Discontinued in Phase 2 | Breast cancer | [22] | |
5 | ERB-196 | Drug Info | Discontinued in Phase 1 | Inflammatory bowel disease | [23] | |
6 | HE2100 | Drug Info | Discontinued in Phase 1 | Thrombocytopenia | [24] | |
7 | ICI-164384 | Drug Info | Terminated | Breast cancer | [25] | |
8 | ZK-119010 | Drug Info | Terminated | Carcinoma | [26] | |
Mode of Action | [+] 4 Modes of Action | + | ||||
Inhibitor | [+] 158 Inhibitor drugs | + | ||||
1 | ARZOXIFENE | Drug Info | [27] | |||
2 | NARINGENIN | Drug Info | [38] | |||
3 | BITHIONOL | Drug Info | [39] | |||
4 | HEXESTROL | Drug Info | [40] | |||
5 | ERA-923 | Drug Info | [42] | |||
6 | HE2100 | Drug Info | [44] | |||
7 | ICI-164384 | Drug Info | [45] | |||
8 | LY-117018 | Drug Info | [46] | |||
9 | ZK-119010 | Drug Info | [47] | |||
10 | 1,2-Bis-(4-hydroxy-phenyl)-3H-inden-5-ol | Drug Info | [48] | |||
11 | 1,8-Dichloro-6-(4-hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
12 | 1-Bromo-6-(4-hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
13 | 1-CHLORO-6-(4-HYDROXYPHENYL)-2-NAPHTHOL | Drug Info | [49], [50] | |||
14 | 1-Fluoro-6-(4-hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
15 | 2,3-diphenyl-1H-indole | Drug Info | [51] | |||
16 | 2-(2-Chloro-4-hydroxy-phenyl)-benzooxazol-5-ol | Drug Info | [52] | |||
17 | 2-(3-Butoxy-4-hydroxy-phenyl)-benzooxazol-6-ol | Drug Info | [52] | |||
18 | 2-(3-Chloro-4-hydroxy-phenyl)-benzooxazol-5-ol | Drug Info | [52] | |||
19 | 2-(3-Chloro-4-hydroxy-phenyl)-benzooxazol-6-ol | Drug Info | [52] | |||
20 | 2-(3-Fluoro-4-hydroxy-phenyl)-benzooxazol-5-ol | Drug Info | [52] | |||
21 | 2-(3-Fluoro-4-hydroxy-phenyl)-benzooxazol-6-ol | Drug Info | [52] | |||
22 | 2-(3-hydroxyphenyl)-1,2'-spirobi[1H-indene]-5-ol | Drug Info | [53] | |||
23 | 2-(3-hydroxyphenyl)-1,2'-spirobi[1H-indene]-6-ol | Drug Info | [53] | |||
24 | 2-(4-Hydroxy-naphthalen-1-yl)-benzooxazol-6-ol | Drug Info | [52] | |||
25 | 2-(4-Hydroxy-phenyl)-1-p-tolyl-3H-inden-5-ol | Drug Info | [48] | |||
26 | 2-(4-Hydroxy-phenyl)-4-methoxy-quinolin-6-ol | Drug Info | [54] | |||
27 | 2-(4-Hydroxy-phenyl)-4-vinyl-quinolin-6-ol | Drug Info | [54] | |||
28 | 2-(4-Hydroxy-phenyl)-7-isopropyl-benzooxazol-5-ol | Drug Info | [52] | |||
29 | 2-(4-Hydroxy-phenyl)-7-methoxy-benzofuran-5-ol | Drug Info | [55] | |||
30 | 2-(4-Hydroxy-phenyl)-7-methoxy-benzooxazol-5-ol | Drug Info | [52] | |||
31 | 2-(4-Hydroxy-phenyl)-7-methyl-benzofuran-5-ol | Drug Info | [55] | |||
32 | 2-(4-Hydroxy-phenyl)-7-phenyl-benzooxazol-5-ol | Drug Info | [52] | |||
33 | 2-(4-Hydroxy-phenyl)-7-propenyl-benzooxazol-5-ol | Drug Info | [52] | |||
34 | 2-(4-Hydroxy-phenyl)-7-propyl-benzooxazol-5-ol | Drug Info | [52] | |||
35 | 2-(4-Hydroxy-phenyl)-7-vinyl-benzooxazol-5-ol | Drug Info | [52] | |||
36 | 2-(4-Hydroxy-phenyl)-benzooxazol-5-ol | Drug Info | [52] | |||
37 | 2-(4-Hydroxy-phenyl)-benzooxazol-6-ol | Drug Info | [52] | |||
38 | 2-(4-Hydroxy-phenyl)-quinolin-6-ol | Drug Info | [54] | |||
39 | 2-(4-HYDROXY-PHENYL)BENZOFURAN-5-OL | Drug Info | [50], [52] | |||
40 | 2-(4-hydroxyphenyl)-1,2'-spirobi[1H-indene]-5-ol | Drug Info | [53] | |||
41 | 2-(5-Hydroxy-naphthalen-1-yl)-benzooxazol-6-ol | Drug Info | [52] | |||
42 | 2-(6-Hydroxy-naphthalen-1-yl)-benzooxazol-5-ol | Drug Info | [52] | |||
43 | 2-(6-Hydroxy-naphthalen-1-yl)-benzooxazol-6-ol | Drug Info | [52] | |||
44 | 2-(6-Hydroxy-naphthalen-2-yl)-benzooxazol-5-ol | Drug Info | [52] | |||
45 | 2-(6-Hydroxy-naphthalen-2-yl)-benzooxazol-6-ol | Drug Info | [52] | |||
46 | 2-Naphthalen-1-yl-benzooxazol-6-ol | Drug Info | [52] | |||
47 | 2-phenyl-1,2'-spirobi[1H-indene]-5'-ol | Drug Info | [53] | |||
48 | 3'-Methoxy-4'Hydroxyclomiphene | Drug Info | [56] | |||
49 | 3,4,6-Trihydroxy-2-(4-hydroxy-phenyl)-inden-1-one | Drug Info | [57] | |||
50 | 3,6-Dihydroxy-2-(4-hydroxy-phenyl)-inden-1-one | Drug Info | [57] | |||
51 | 3,8-dihydroxy-4-methyl-6H-benzo[c]chromen-6-one | Drug Info | [58] | |||
52 | 3,8-dihydroxy-7-methyl-6H-benzo[c]chromen-6-one | Drug Info | [58] | |||
53 | 3-(2-Hydroxy-phenyl)-benzo[d]isoxazol-6-ol | Drug Info | [52] | |||
54 | 3-(4-Hydroxy-phenyl)-4H-chromen-7-ol | Drug Info | [59] | |||
55 | 3-(4-Hydroxy-phenyl)-benzo[d]isoxazol-5-ol | Drug Info | [52] | |||
56 | 3-(4-Hydroxy-phenyl)-benzo[d]isoxazol-6-ol | Drug Info | [52] | |||
57 | 3-(5-Hydroxy-benzooxazol-2-yl)-benzene-1,2-diol | Drug Info | [52] | |||
58 | 3-(6-Hydroxy-benzooxazol-2-yl)-benzene-1,2-diol | Drug Info | [52] | |||
59 | 3-chloro-4-(4-hydroxyphenyl)salicylaldoxime | Drug Info | [60] | |||
60 | 3-hydroxy-4,10-dimethyl-6H-benzo[c]chromen-6-one | Drug Info | [58] | |||
61 | 3-hydroxy-4,7-dimethyl-6H-benzo[c]chromen-6-one | Drug Info | [58] | |||
62 | 3-hydroxy-4-methyl-6H-benzo[c]chromen-6-one | Drug Info | [58] | |||
63 | 3-hydroxy-8,10-dimethyl-6H-benzo[c]chromen-6-one | Drug Info | [58] | |||
64 | 3-[1-ethyl-2-(3-hydroxyphenyl)butyl]phenol | Drug Info | [61] | |||
65 | 4',5,7-trihydroxy-6,8-dimethylisoflavone | Drug Info | [62] | |||
66 | 4,10-dimethyl-6H-benzo[c]chromene-3,8-diol | Drug Info | [58] | |||
67 | 4,6,10-trimethyl-6H-benzo[c]chromene-3,8-diol | Drug Info | [58] | |||
68 | 4,6,6,7-tetramethyl-6H-benzo[c]chromene-3,8-diol | Drug Info | [58] | |||
69 | 4,6,7,10-tetramethyl-6H-benzo[c]chromene-3,8-diol | Drug Info | [58] | |||
70 | 4,6,7-trimethyl-6H-benzo[c]chromene-3,8-diol | Drug Info | [58] | |||
71 | 4,7-dimethyl-6H-benzo[c]chromene-3,8-diol | Drug Info | [58] | |||
72 | 4-(2-phenyl-1H-benzo[d]imidazol-1-yl)phenol | Drug Info | [51] | |||
73 | 4-(2-phenyl-1H-indol-3-yl)phenol | Drug Info | [51] | |||
74 | 4-(3-(4-hydroxyphenyl)-1H-indol-2-yl)phenol | Drug Info | [51] | |||
75 | 4-(3-phenyl-1H-indol-2-yl)phenol | Drug Info | [51] | |||
76 | 4-(4-HYDROXYPHENYL)-1-NAPHTHALDEHYDE OXIME | Drug Info | [50] | |||
77 | 4-(5-Hydroxy-benzooxazol-2-yl)-benzene-1,3-diol | Drug Info | [52] | |||
78 | 4-(6-Hydroxy-benzooxazol-2-yl)-benzene-1,2-diol | Drug Info | [52] | |||
79 | 4-(6-Hydroxy-benzooxazol-2-yl)-benzene-1,3-diol | Drug Info | [52] | |||
80 | 4-Benzo[d]isoxazol-3-yl-benzene-1,3-diol | Drug Info | [52] | |||
81 | 4-Bromo-2-(4-hydroxy-phenyl)-quinolin-6-ol | Drug Info | [54] | |||
82 | 4-Chloro-2-(4-hydroxy-phenyl)-quinolin-6-ol | Drug Info | [54] | |||
83 | 4-Ethyl-2-(4-hydroxy-phenyl)-quinolin-6-ol | Drug Info | [54] | |||
84 | 4-Ethynyl-2-(4-hydroxy-phenyl)-quinolin-6-ol | Drug Info | [54] | |||
85 | 4-Naphthalen-2-yl-phenol | Drug Info | [49] | |||
86 | 4-[1,2-bis(4-hydroxyphenyl)but-1-enyl]phenol | Drug Info | [63] | |||
87 | 4-[1,2-bis(4-hydroxyphenyl)hex-1-enyl]phenol | Drug Info | [63] | |||
88 | 4-[1,2-bis(4-hydroxyphenyl)pent-1-enyl]phenol | Drug Info | [63] | |||
89 | 4-[1,2-bis(4-hydroxyphenyl)vinyl]phenol | Drug Info | [63] | |||
90 | 4-[2,2-bis(4-hydroxyphenyl)-1-methylvinyl]phenol | Drug Info | [63] | |||
91 | 5,7-dihydroxy-3-phenyl-3H-quinazolin-4-one | Drug Info | [64] | |||
92 | 5-Bromo-2-(4-hydroxy-phenyl)-quinolin-6-ol | Drug Info | [54] | |||
93 | 5-Chloro-2-(4-hydroxy-phenyl)-benzooxazol-6-ol | Drug Info | [52] | |||
94 | 5-Chloro-2-(4-hydroxy-phenyl)-quinolin-6-ol | Drug Info | [54] | |||
95 | 6-(2,5-Difluoro-4-hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
96 | 6-(2,6-Difluoro-4-hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
97 | 6-(2-Chloro-4-hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
98 | 6-(2-Fluoro-4-hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
99 | 6-(2-Hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
100 | 6-(3,5-Difluoro-4-hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
101 | 6-(3-Chloro-4-hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
102 | 6-(3-Fluoro-4-hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
103 | 6-(3-Hydroxy-phenyl)-naphthalen-1-ol | Drug Info | [49] | |||
104 | 6-(3-Hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
105 | 6-(4-Hydroxy-2-methoxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
106 | 6-(4-Hydroxy-2-methyl-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
107 | 6-(4-Hydroxy-phenyl)-1-methoxy-naphthalen-2-ol | Drug Info | [49] | |||
108 | 6-(4-Hydroxy-phenyl)-1-methyl-naphthalen-2-ol | Drug Info | [49] | |||
109 | 6-(4-Hydroxy-phenyl)-1-nitro-naphthalen-2-ol | Drug Info | [49] | |||
110 | 6-(4-Hydroxy-phenyl)-1-phenyl-naphthalen-2-ol | Drug Info | [49] | |||
111 | 6-(4-Hydroxy-phenyl)-naphthalen-1-ol | Drug Info | [49] | |||
112 | 6-(4-Hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [54] | |||
113 | 6-Chloro-2-(4-hydroxy-phenyl)-benzooxazol-5-ol | Drug Info | [52] | |||
114 | 6-ethyl-4,7-dimethyl-6H-benzo[c]chromene-3,8-diol | Drug Info | [58] | |||
115 | 6-Phenyl-naphthalen-2-ol | Drug Info | [49] | |||
116 | 7-(3-Hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
117 | 7-(4-Hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
118 | 7-Allyl-2-(4-hydroxy-phenyl)-benzooxazol-5-ol | Drug Info | [52] | |||
119 | 7-Bromo-2-(4-hydroxy-phenyl)-benzofuran-5-ol | Drug Info | [55] | |||
120 | 7-Butyl-2-(4-hydroxy-phenyl)-benzooxazol-5-ol | Drug Info | [52] | |||
121 | 7-Chloro-2-(4-hydroxy-phenyl)-benzofuran-5-ol | Drug Info | [55] | |||
122 | 7-Ethyl-2-(4-hydroxy-phenyl)-benzooxazol-5-ol | Drug Info | [52] | |||
123 | 7-Ethynyl-2-(4-hydroxy-phenyl)-benzooxazol-5-ol | Drug Info | [52] | |||
124 | 7-hydroxy-1,2,9,9a-tetrahydrofluoren-3-one | Drug Info | [65] | |||
125 | 7-hydroxy-3-(4-hydroxyphenyl)-3H-quinazolin-4-one | Drug Info | [64] | |||
126 | 7-Phenyl-naphthalen-2-ol | Drug Info | [49] | |||
127 | 8-(2,2-dimethylpropyl)naringenin | Drug Info | [38] | |||
128 | 8-(2-methylpropyl)naringenin | Drug Info | [38] | |||
129 | 8-(3-methylbutyl)naringenin | Drug Info | [38] | |||
130 | 8-benzylnaringenin | Drug Info | [38] | |||
131 | 8-Chloro-6-(4-hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
132 | 8-Fluoro-6-(4-hydroxy-phenyl)-naphthalen-2-ol | Drug Info | [49] | |||
133 | 8-methylnaringenin | Drug Info | [38] | |||
134 | 8-n-heptylnaringenin | Drug Info | [38] | |||
135 | 8-n-nonylnaringenin | Drug Info | [38] | |||
136 | 8-n-pentylnaringenin | Drug Info | [38] | |||
137 | 8-n-propylnaringenin | Drug Info | [38] | |||
138 | 8-n-undecylnaringenin | Drug Info | [38] | |||
139 | Acetate Ion | Drug Info | [66] | |||
140 | BROUSSONIN A | Drug Info | [68] | |||
141 | COUMESTROL | Drug Info | [59] | |||
142 | CP-394531 | Drug Info | [69] | |||
143 | CP-409069 | Drug Info | [69] | |||
144 | daidzein | Drug Info | [62] | |||
145 | DIHYDRORALOXIFENE | Drug Info | [71] | |||
146 | Doxorubicin-Formaldehyde Conjugate | Drug Info | [72] | |||
147 | EFFUSOL | Drug Info | [58] | |||
148 | Geldanamycin-estradiol hybrid | Drug Info | [74] | |||
149 | GNF-PF-3037 | Drug Info | [39] | |||
150 | MORIN | Drug Info | [39] | |||
151 | Nafoxidine | Drug Info | [76] | |||
152 | Para-Mercury-Benzenesulfonic Acid | Drug Info | [66] | |||
153 | SOPHORAFLAVANONE B | Drug Info | [38] | |||
154 | THIOGENISTEIN | Drug Info | [64] | |||
155 | TUPICHINOL C | Drug Info | [68] | |||
156 | WAY-169916 | Drug Info | [80] | |||
157 | ZK-164015 | Drug Info | [81] | |||
158 | [1,1':2',1'']Terphenyl-4'-carbaldehyde oxime | Drug Info | [82] | |||
Antagonist | [+] 7 Antagonist drugs | + | ||||
1 | Conjugated Estrogens | Drug Info | [1], [28] | |||
2 | MF-101 | Drug Info | [31] | |||
3 | EM-800 | Drug Info | [41] | |||
4 | HPTE | Drug Info | [75] | |||
5 | PHTPP | Drug Info | [77] | |||
6 | R,R-THC | Drug Info | [78] | |||
7 | Trans-hydroxytamoxifen | Drug Info | [79] | |||
Agonist | [+] 14 Agonist drugs | + | ||||
1 | Estrogen | Drug Info | [29] | |||
2 | AUS-131 | Drug Info | [33] | |||
3 | ERB-041 | Drug Info | [5], [34] | |||
4 | Erteberel | Drug Info | [35] | |||
5 | VG-101 | Drug Info | [36] | |||
6 | ERB-257 | Drug Info | [37] | |||
7 | ERB-196 | Drug Info | [43] | |||
8 | bisphenol A | Drug Info | [67] | |||
9 | diarylpropionitril | Drug Info | [70] | |||
10 | ERB-002 | Drug Info | [73] | |||
11 | GTx-878 | Drug Info | [73] | |||
12 | KB-9520 | Drug Info | [73] | |||
13 | NDC-1022 | Drug Info | [73] | |||
14 | WAY200070 | Drug Info | [52] | |||
Modulator | [+] 4 Modulator drugs | + | ||||
1 | Trilostane | Drug Info | [30] | |||
2 | Premarin/Pravachol | Drug Info | [9] | |||
3 | Genistein | Drug Info | [32] | |||
4 | GTx-822 | Drug Info | [73] |
Cell-based Target Expression Variations | Top | |||||
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Cell-based Target Expression Variations |
Drug Binding Sites of Target | Top | |||||
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Ligand Name: Estradiol | Ligand Info | |||||
Structure Description | Crystal structure of phosphorylated estrogen receptor beta ligand binding domain | PDB:3OLL | ||||
Method | X-ray diffraction | Resolution | 1.50 Å | Mutation | No | [83] |
PDB Sequence |
ALSPEQLVLT
271 LLEAEPPHVL281 ISRPSAPFTE291 ASMMMSLTKL301 ADKELVHMIS311 WAKKIPGFVE 321 LSLFDQVRLL331 ESCWMEVLMM341 GLMWRSIDHP351 GKLIFAPDLV361 LDRDEGKCVE 371 GILEIFDMLL381 ATTSRFRELK391 LQHKEYLCVK401 AMILLNSSMY411 PLVTATADSS 423 RKLAHLLNAV433 TDALVWVIAK443 SGISSQQQSM453 RLANLLMLLS463 HVRHASNKGM 473 EHLLNMKCKN483 VVPVDLLLEM494 LNAH
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Click to View More Binding Site Information of This Target and Ligand Pair | ||||||
Ligand Name: Genistein | Ligand Info | |||||
Structure Description | HUMAN OESTROGEN RECEPTOR BETA LIGAND-BINDING DOMAIN IN COMPLEX WITH PARTIAL AGONIST GENISTEIN | PDB:1QKM | ||||
Method | X-ray diffraction | Resolution | 1.80 Å | Mutation | No | [84] |
PDB Sequence |
LDALSPEQLV
269 LTLLEAEPPH279 VLISRPASMM295 MSLTKLADKE305 LVHMISWAKK315 IPGFVELSLF 325 DQVRLLESCW335 MEVLMMGLMW345 RSIDHPGKLI355 FAPDLVLDRD365 EGKCVEGILE 375 IFDMLLATTS385 RFRELKLQHK395 EYLCVKAMIL405 LNSSMYPLVA420 DSSRKLAHLL 430 NAVTDALVWV440 IAKSGISSQQ450 QSMRLANLLM460 LLSHVRHASN470 KGMEHLLNMK 480 CKNVVPVYDL490 LLEMLNAHVL500
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Click to View More Binding Site Information of This Target and Ligand Pair | ||||||
Click to View More Binding Site Information of This Target with Different Ligands |
Different Human System Profiles of Target | Top |
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Human Similarity Proteins
of target is determined by comparing the sequence similarity of all human proteins with the target based on BLAST. The similarity proteins for a target are defined as the proteins with E-value < 0.005 and outside the protein families of the target.
A target that has fewer human similarity proteins outside its family is commonly regarded to possess a greater capacity to avoid undesired interactions and thus increase the possibility of finding successful drugs
(Brief Bioinform, 21: 649-662, 2020).
Human Pathway Affiliation
of target is determined by the life-essential pathways provided on KEGG database. The target-affiliated pathways were defined based on the following two criteria (a) the pathways of the studied target should be life-essential for both healthy individuals and patients, and (b) the studied target should occupy an upstream position in the pathways and therefore had the ability to regulate biological function.
Targets involved in a fewer pathways have greater likelihood to be successfully developed, while those associated with more human pathways increase the chance of undesirable interferences with other human processes
(Pharmacol Rev, 58: 259-279, 2006).
Biological Network Descriptors
of target is determined based on a human protein-protein interactions (PPI) network consisting of 9,309 proteins and 52,713 PPIs, which were with a high confidence score of ≥ 0.95 collected from STRING database.
The network properties of targets based on protein-protein interactions (PPIs) have been widely adopted for the assessment of target’s druggability. Proteins with high node degree tend to have a high impact on network function through multiple interactions, while proteins with high betweenness centrality are regarded to be central for communication in interaction networks and regulate the flow of signaling information
(Front Pharmacol, 9, 1245, 2018;
Curr Opin Struct Biol. 44:134-142, 2017).
Human Similarity Proteins
Human Pathway Affiliation
Biological Network Descriptors
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There is no similarity protein (E value < 0.005) for this target
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KEGG Pathway | Pathway ID | Affiliated Target | Pathway Map |
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Estrogen signaling pathway | hsa04915 | Affiliated Target |
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Class: Organismal Systems => Endocrine system | Pathway Hierarchy | ||
Prolactin signaling pathway | hsa04917 | Affiliated Target |
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Class: Organismal Systems => Endocrine system | Pathway Hierarchy | ||
GnRH secretion | hsa04929 | Affiliated Target |
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Class: Organismal Systems => Endocrine system | Pathway Hierarchy |
Degree | 15 | Degree centrality | 1.61E-03 | Betweenness centrality | 2.99E-04 |
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Closeness centrality | 2.50E-01 | Radiality | 1.44E+01 | Clustering coefficient | 2.86E-01 |
Neighborhood connectivity | 5.67E+01 | Topological coefficient | 1.04E-01 | Eccentricity | 11 |
Download | Click to Download the Full PPI Network of This Target | ||||
Chemical Structure based Activity Landscape of Target | Top |
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Drug Property Profile of Target | Top | |
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(1) Molecular Weight (mw) based Drug Clustering | (2) Octanol/Water Partition Coefficient (xlogp) based Drug Clustering | |
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(3) Hydrogen Bond Donor Count (hbonddonor) based Drug Clustering | (4) Hydrogen Bond Acceptor Count (hbondacc) based Drug Clustering | |
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(5) Rotatable Bond Count (rotbonds) based Drug Clustering | (6) Topological Polar Surface Area (polararea) based Drug Clustering | |
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"RO5" indicates the cutoff set by lipinski's rule of five; "D123AB" colored in GREEN denotes the no violation of any cutoff in lipinski's rule of five; "D123AB" colored in PURPLE refers to the violation of only one cutoff in lipinski's rule of five; "D123AB" colored in BLACK represents the violation of more than one cutoffs in lipinski's rule of five |
Co-Targets | Top | |||||
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Co-Targets |
Target Poor or Non Binders | Top | |||||
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Target Poor or Non Binders |
Target Regulators | Top | |||||
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Target-regulating microRNAs | ||||||
Target-interacting Proteins |
Target Profiles in Patients | Top | |||||
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Target Expression Profile (TEP) |
Target Affiliated Biological Pathways | Top | |||||
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KEGG Pathway | [+] 2 KEGG Pathways | + | ||||
1 | Estrogen signaling pathway | |||||
2 | Prolactin signaling pathway | |||||
PID Pathway | [+] 3 PID Pathways | + | ||||
1 | Plasma membrane estrogen receptor signaling | |||||
2 | Validated nuclear estrogen receptor beta network | |||||
3 | Validated nuclear estrogen receptor alpha network | |||||
Reactome | [+] 1 Reactome Pathways | + | ||||
1 | Nuclear Receptor transcription pathway | |||||
WikiPathways | [+] 4 WikiPathways | + | ||||
1 | SIDS Susceptibility Pathways | |||||
2 | Ovarian Infertility Genes | |||||
3 | Integrated Pancreatic Cancer Pathway | |||||
4 | Nuclear Receptors |
Target-Related Models and Studies | Top | |||||
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Target Validation | ||||||
Target QSAR Model |
References | Top | |||||
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REF 12 | URL: http://www.guidetopharmacology.org Nucleic Acids Res. 2015 Oct 12. pii: gkv1037. The IUPHAR/BPS Guide to PHARMACOLOGY in 2016: towards curated quantitative interactions between 1300 protein targets and 6000 ligands. (Ligand id: 6700). | |||||
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REF 32 | Company report (Axcentua) | |||||
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