Target Information
Target General Information | Top | |||||
---|---|---|---|---|---|---|
Target ID |
T64591
(Former ID: TTDS00399)
|
|||||
Target Name |
5-HT 3A receptor (HTR3A)
|
|||||
Synonyms |
Serotonin-gated ion channel receptor; Serotonin receptor 3A; HTR3; 5HT3R; 5-hydroxytryptamine receptor 3A; 5-HT3RA; 5-HT3A; 5-HT3-A; 5-HT 3A
Click to Show/Hide
|
|||||
Gene Name |
HTR3A
|
|||||
Target Type |
Successful target
|
[1] | ||||
Disease | [+] 5 Target-related Diseases | + | ||||
1 | Chronic pain [ICD-11: MG30] | |||||
2 | Corneal disease [ICD-11: 9A76-9A78] | |||||
3 | Epilepsy/seizure [ICD-11: 8A61-8A6Z] | |||||
4 | Irritable bowel syndrome [ICD-11: DD91] | |||||
5 | Nausea/vomiting [ICD-11: MD90] | |||||
Function |
This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor is a ligand-gated ion channel, which when activated causes fast, depolarizing responses in neurons. It is a cation-specific, but otherwise relatively nonselective, ion channel.
Click to Show/Hide
|
|||||
BioChemical Class |
GPCR rhodopsin
|
|||||
UniProt ID | ||||||
Sequence |
MLLWVQQALLALLLPTLLAQGEARRSRNTTRPALLRLSDYLLTNYRKGVRPVRDWRKPTT
VSIDVIVYAILNVDEKNQVLTTYIWYRQYWTDEFLQWNPEDFDNITKLSIPTDSIWVPDI LINEFVDVGKSPNIPYVYIRHQGEVQNYKPLQVVTACSLDIYNFPFDVQNCSLTFTSWLH TIQDINISLWRLPEKVKSDRSVFMNQGEWELLGVLPYFREFSMESSNYYAEMKFYVVIRR RPLFYVVSLLLPSIFLMVMDIVGFYLPPNSGERVSFKITLLLGYSVFLIIVSDTLPATAI GTPLIGVYFVVCMALLVISLAETIFIVRLVHKQDLQQPVPAWLRHLVLERIAWLLCLREQ STSQRPPATSQATKTDDCSAMGNHCSHMGGPQDFEKSPRDRCSPPPPPREASLAVCGLLQ ELSSIRQFLEKRDEIREVARDWLRVGSVLDKLLFHIYLLAVLAYSITLVMLWSIWQYA Click to Show/Hide
|
|||||
3D Structure | Click to Show 3D Structure of This Target | AlphaFold | ||||
ADReCS ID | BADD_A00273 ; BADD_A02979 ; BADD_A04075 ; BADD_A04623 | |||||
HIT2.0 ID | T39GNZ |
Drugs and Modes of Action | Top | |||||
---|---|---|---|---|---|---|
Approved Drug(s) | [+] 7 Approved Drugs | + | ||||
1 | Alosetron | Drug Info | Approved | Irritable bowel syndrome | [2], [3] | |
2 | Dolasetron | Drug Info | Approved | Nausea | [4] | |
3 | Levetiracetam | Drug Info | Approved | Fibromyalgia | [5] | |
4 | Palonosetron | Drug Info | Approved | Nausea | [4], [6] | |
5 | Palonosetron + fosnetupitant | Drug Info | Approved | Chemotherapy-induced nausea | [7] | |
6 | Procaine | Drug Info | Approved | Anaesthesia | [8] | |
7 | Tropisetron | Drug Info | Approved | Fibromyalgia | [5], [9] | |
Clinical Trial Drug(s) | [+] 1 Clinical Trial Drugs | + | ||||
1 | Cilansetron | Drug Info | Phase 3 | Irritable bowel syndrome | [3], [10] | |
Discontinued Drug(s) | [+] 4 Discontinued Drugs | + | ||||
1 | Norcisapride | Drug Info | Discontinued in Phase 2 | Gastroesophageal reflux disease | [11] | |
2 | YM-114 | Drug Info | Discontinued in Phase 2 | Nausea | [12] | |
3 | AS-8112 | Drug Info | Terminated | Vomiting | [13] | |
4 | BP4.879a | Drug Info | Terminated | Schizophrenia | [14] | |
Preclinical Drug(s) | [+] 1 Preclinical Drugs | + | ||||
1 | ATI-17000 | Drug Info | Preclinical | Irritable bowel syndrome | [3] | |
Mode of Action | [+] 6 Modes of Action | + | ||||
Antagonist | [+] 16 Antagonist drugs | + | ||||
1 | Alosetron | Drug Info | [15], [16] | |||
2 | Dolasetron | Drug Info | [17] | |||
3 | Levetiracetam | Drug Info | [5] | |||
4 | Palonosetron | Drug Info | [18] | |||
5 | Palonosetron + fosnetupitant | Drug Info | [7] | |||
6 | Procaine | Drug Info | [1] | |||
7 | Tropisetron | Drug Info | [5] | |||
8 | YM-114 | Drug Info | [8], [22] | |||
9 | ATI-17000 | Drug Info | [3] | |||
10 | AS-8112 | Drug Info | [23] | |||
11 | BP4.879a | Drug Info | [24] | |||
12 | (S)-zacopride | Drug Info | [26] | |||
13 | [3H](S)-zacopride | Drug Info | [49] | |||
14 | [3H]GR65630 | Drug Info | [50] | |||
15 | [3H]granisetron | Drug Info | [51] | |||
16 | [3H]ramosetron | Drug Info | [52] | |||
Modulator | [+] 1 Modulator drugs | + | ||||
1 | Cilansetron | Drug Info | [19] | |||
Inhibitor | [+] 25 Inhibitor drugs | + | ||||
1 | BEMESETRON | Drug Info | [20] | |||
2 | Norcisapride | Drug Info | [21] | |||
3 | (4-Quinolin-2-ylpiperazin-1-yl)acetic Acid | Drug Info | [25] | |||
4 | 1-(biphenyl-4-yl)-3-(4-(piperidin-1-yl)butyl)urea | Drug Info | [27] | |||
5 | 10,11-dihydro-5H-dibenzo[b,f]azepine | Drug Info | [29] | |||
6 | 2-(1H-Imidazol-4-ylmethyl)-4-phenyl-thiazole | Drug Info | [30] | |||
7 | 2-(4-Benzyl-piperazin-1-yl)-benzothiazole | Drug Info | [31] | |||
8 | 2-(4-Methyl-piperazin-1-yl)-quinoline | Drug Info | [32] | |||
9 | 3alpha-(1'-Methyl-2'-Indolecarbonyloxy)-tropane | Drug Info | [34] | |||
10 | 3alpha-(2'-Indolecarbonyloxy)-nortropane | Drug Info | [34] | |||
11 | 4-((naphthalen-2-yloxy)methyl)piperidine | Drug Info | [35] | |||
12 | 4-(4-butylpiperidin-1-yl)-1-o-tolylbutan-1-one | Drug Info | [36] | |||
13 | 4-Benzoxazo-2-yl-1,4-diazabicyclo[3.2.2]nonane | Drug Info | [37] | |||
14 | 5,6-dichloro-3,4-dihydroquinazolin-2-amine | Drug Info | [38] | |||
15 | 5-chloro-3,4-dihydroquinazolin-2-amine | Drug Info | [38] | |||
16 | 6-(4-Methyl-piperazin-1-yl)-phenanthridine | Drug Info | [32] | |||
17 | 7-(piperidin-4-ylmethoxy)-2-naphthonitrile | Drug Info | [35] | |||
18 | A-987306 | Drug Info | [40] | |||
19 | BRL-24682 | Drug Info | [42] | |||
20 | CP-810123 | Drug Info | [37] | |||
21 | FLUPENTIXOLE | Drug Info | [29] | |||
22 | MESULERGINE | Drug Info | [43] | |||
23 | PH-709829 | Drug Info | [45] | |||
24 | QUIPAZINE | Drug Info | [46] | |||
25 | SEROTONIN | Drug Info | [32] | |||
Agonist | [+] 3 Agonist drugs | + | ||||
1 | 1-phenylbiguanide | Drug Info | [28] | |||
2 | 2-methyl-5-HT | Drug Info | [33] | |||
3 | meta-chlorphenylbiguanide | Drug Info | [44] | |||
Modulator (allosteric modulator) | [+] 2 Modulator (allosteric modulator) drugs | + | ||||
1 | 5-hydroxyindole | Drug Info | [39] | |||
2 | trichloroethanol | Drug Info | [48] | |||
Blocker (channel blocker) | [+] 2 Blocker (channel blocker) drugs | + | ||||
1 | bilobalide | Drug Info | [41] | |||
2 | TMB-8 | Drug Info | [47] |
Cell-based Target Expression Variations | Top | |||||
---|---|---|---|---|---|---|
Cell-based Target Expression Variations |
Different Human System Profiles of Target | Top |
---|---|
Human Similarity Proteins
of target is determined by comparing the sequence similarity of all human proteins with the target based on BLAST. The similarity proteins for a target are defined as the proteins with E-value < 0.005 and outside the protein families of the target.
A target that has fewer human similarity proteins outside its family is commonly regarded to possess a greater capacity to avoid undesired interactions and thus increase the possibility of finding successful drugs
(Brief Bioinform, 21: 649-662, 2020).
Human Pathway Affiliation
of target is determined by the life-essential pathways provided on KEGG database. The target-affiliated pathways were defined based on the following two criteria (a) the pathways of the studied target should be life-essential for both healthy individuals and patients, and (b) the studied target should occupy an upstream position in the pathways and therefore had the ability to regulate biological function.
Targets involved in a fewer pathways have greater likelihood to be successfully developed, while those associated with more human pathways increase the chance of undesirable interferences with other human processes
(Pharmacol Rev, 58: 259-279, 2006).
Human Similarity Proteins
Human Pathway Affiliation
|
There is no similarity protein (E value < 0.005) for this target
|
KEGG Pathway | Pathway ID | Affiliated Target | Pathway Map |
---|---|---|---|
Serotonergic synapse | hsa04726 | Affiliated Target |
|
Class: Organismal Systems => Nervous system | Pathway Hierarchy | ||
Taste transduction | hsa04742 | Affiliated Target |
|
Class: Organismal Systems => Sensory system | Pathway Hierarchy |
Chemical Structure based Activity Landscape of Target | Top |
---|---|
Drug Property Profile of Target | Top | |
---|---|---|
(1) Molecular Weight (mw) based Drug Clustering | (2) Octanol/Water Partition Coefficient (xlogp) based Drug Clustering | |
|
||
(3) Hydrogen Bond Donor Count (hbonddonor) based Drug Clustering | (4) Hydrogen Bond Acceptor Count (hbondacc) based Drug Clustering | |
|
||
(5) Rotatable Bond Count (rotbonds) based Drug Clustering | (6) Topological Polar Surface Area (polararea) based Drug Clustering | |
|
||
"RO5" indicates the cutoff set by lipinski's rule of five; "D123AB" colored in GREEN denotes the no violation of any cutoff in lipinski's rule of five; "D123AB" colored in PURPLE refers to the violation of only one cutoff in lipinski's rule of five; "D123AB" colored in BLACK represents the violation of more than one cutoffs in lipinski's rule of five |
Co-Targets | Top | |||||
---|---|---|---|---|---|---|
Co-Targets |
Target Poor or Non Binders | Top | |||||
---|---|---|---|---|---|---|
Target Poor or Non Binders |
Target Profiles in Patients | Top | |||||
---|---|---|---|---|---|---|
Target Expression Profile (TEP) |
Target Affiliated Biological Pathways | Top | |||||
---|---|---|---|---|---|---|
KEGG Pathway | [+] 1 KEGG Pathways | + | ||||
1 | Serotonergic synapse | |||||
NetPath Pathway | [+] 1 NetPath Pathways | + | ||||
1 | IL2 Signaling Pathway | |||||
Panther Pathway | [+] 1 Panther Pathways | + | ||||
1 | 5HT3 type receptor mediated signaling pathway | |||||
Reactome | [+] 1 Reactome Pathways | + | ||||
1 | Ligand-gated ion channel transport | |||||
WikiPathways | [+] 2 WikiPathways | + | ||||
1 | SIDS Susceptibility Pathways | |||||
2 | Iron uptake and transport |
Target-Related Models and Studies | Top | |||||
---|---|---|---|---|---|---|
Target Validation |
References | Top | |||||
---|---|---|---|---|---|---|
REF 1 | Local anesthetics have different mechanisms and sites of action at recombinant 5-HT3 receptors. Reg Anesth Pain Med. 2007 Nov-Dec;32(6):462-70. | |||||
REF 2 | URL: http://www.guidetopharmacology.org Nucleic Acids Res. 2015 Oct 12. pii: gkv1037. The IUPHAR/BPS Guide to PHARMACOLOGY in 2016: towards curated quantitative interactions between 1300 protein targets and 6000 ligands. (Ligand id: 2296). | |||||
REF 3 | Emerging drugs for irritable bowel syndrome. Expert Opin Emerg Drugs. 2006 May;11(2):293-313. | |||||
REF 4 | Natural products as sources of new drugs over the last 25 years. J Nat Prod. 2007 Mar;70(3):461-77. | |||||
REF 5 | Emerging therapies for fibromyalgia. Expert Opin Emerg Drugs. 2008 Mar;13(1):53-62. | |||||
REF 6 | URL: http://www.guidetopharmacology.org Nucleic Acids Res. 2015 Oct 12. pii: gkv1037. The IUPHAR/BPS Guide to PHARMACOLOGY in 2016: towards curated quantitative interactions between 1300 protein targets and 6000 ligands. (Ligand id: 7486). | |||||
REF 7 | 2018 FDA drug approvals.Nat Rev Drug Discov. 2019 Feb;18(2):85-89. | |||||
REF 8 | Drugs@FDA. U.S. Food and Drug Administration. U.S. Department of Health & Human Services. 2015 | |||||
REF 9 | URL: http://www.guidetopharmacology.org Nucleic Acids Res. 2015 Oct 12. pii: gkv1037. The IUPHAR/BPS Guide to PHARMACOLOGY in 2016: towards curated quantitative interactions between 1300 protein targets and 6000 ligands. (Ligand id: 260). | |||||
REF 10 | URL: http://www.guidetopharmacology.org Nucleic Acids Res. 2015 Oct 12. pii: gkv1037. The IUPHAR/BPS Guide to PHARMACOLOGY in 2016: towards curated quantitative interactions between 1300 protein targets and 6000 ligands. (Ligand id: 2297). | |||||
REF 11 | Trusted, scientifically sound profiles of drug programs, clinical trials, safety reports, and company deals, written by scientists. Springer. 2015. Adis Insight (drug id 800007174) | |||||
REF 12 | Trusted, scientifically sound profiles of drug programs, clinical trials, safety reports, and company deals, written by scientists. Springer. 2015. Adis Insight (drug id 800002741) | |||||
REF 13 | Trusted, scientifically sound profiles of drug programs, clinical trials, safety reports, and company deals, written by scientists. Springer. 2015. Adis Insight (drug id 800009088) | |||||
REF 14 | The pipeline and future of drug development in schizophrenia. Mol Psychiatry. 2007 Oct;12(10):904-22. | |||||
REF 15 | Efficacy of 5-HT3 antagonists and 5-HT4 agonists in irritable bowel syndrome: systematic review and meta-analysis. Am J Gastroenterol. 2009 Jul;104(7):1831-43; quiz 1844. | |||||
REF 16 | Role of serotonin in gastrointestinal motility and irritable bowel syndrome. Clin Chim Acta. 2009 May;403(1-2):47-55. | |||||
REF 17 | Palonosetron plus dexamethasone versus granisetron plus dexamethasone for prevention of nausea and vomiting during chemotherapy: a double-blind, do... Lancet Oncol. 2009 Feb;10(2):115-24. | |||||
REF 18 | Management of postoperative nausea and vomiting: focus on palonosetron. Ther Clin Risk Manag. 2009 Feb;5(1):21-34. | |||||
REF 19 | Cilansetron: a new serotonergic agent for the irritable bowel syndrome with diarrhoea.Expert Opin Investig Drugs.2005 Feb;14(2):185-93. | |||||
REF 20 | Zatosetron, a potent, selective, and long-acting 5HT3 receptor antagonist: synthesis and structure-activity relationships. J Med Chem. 1992 Jan 24;35(2):310-9. | |||||
REF 21 | mu-Opioid/5-HT4 dual pharmacologically active agents-efforts towards an effective opioid analgesic with less GI and respiratory side effects (Part I). Bioorg Med Chem Lett. 2009 Oct 1;19(19):5679-83. | |||||
REF 22 | Effect of serotonin (5-HT)3-receptor antagonists YM060, YM114 (KAE-393), ondansetron and granisetron on 5-HT4 receptors and gastric emptying in rodents. Jpn J Pharmacol. 1995 Nov;69(3):205-14. | |||||
REF 23 | Emerging drugs for chemotherapy-induced emesis. Expert Opin Emerg Drugs. 2006 Mar;11(1):137-51. | |||||
REF 24 | Pharmacological and regional characterization of [3H]LY278584 binding sites in human brain. J Neurochem. 1993 Feb;60(2):730-7. | |||||
REF 25 | Specific targeting of peripheral serotonin 5-HT(3) receptors. Synthesis, biological investigation, and structure-activity relationships. J Med Chem. 2009 Jun 11;52(11):3548-62. | |||||
REF 26 | Pharmacological comparison of human homomeric 5-HT3A receptors versus heteromeric 5-HT3A/3B receptors. Neuropharmacology. 2001 Aug;41(2):282-4. | |||||
REF 27 | Novel alpha-7 nicotinic acetylcholine receptor agonists containing a urea moiety: identification and characterization of the potent, selective, and... J Med Chem. 2010 Jun 10;53(11):4379-89. | |||||
REF 28 | Allosteric interactions among agonists and antagonists at 5-hydroxytryptamine3 receptors. J Neurochem. 1995 Jul;65(1):104-10. | |||||
REF 29 | Molecular properties of psychopharmacological drugs determining non-competitive inhibition of 5-HT3A receptors. Eur J Med Chem. 2009 Jun;44(6):2667-72. | |||||
REF 30 | Aromatic thiazole derivatives: structurally novel and selective serotonin-3 receptor antagonists. J Med Chem. 1990 Jan;33(1):13-6. | |||||
REF 31 | Synthesis of 2-piperazinylbenzothiazole and 2-piperazinylbenzoxazole derivatives with 5-HT3 antagonist and 5-HT4 agonist properties. J Med Chem. 1994 Apr 29;37(9):1320-5. | |||||
REF 32 | Novel potent and selective central 5-HT3 receptor ligands provided with different intrinsic efficacy. 2. Molecular basis of the intrinsic efficacy ... J Med Chem. 1999 May 6;42(9):1556-75. | |||||
REF 33 | Pharmacological profile of YM-31636, a novel 5-HT3 receptor agonist, in vitro. Eur J Pharmacol. 2000 Dec 8;409(2):195-201. | |||||
REF 34 | Synthesis of heteroaromatic tropeines and heterogeneous binding to glycine receptors. Bioorg Med Chem. 2009 Oct 1;17(19):6872-8. | |||||
REF 35 | Design and optimization of selective serotonin re-uptake inhibitors with high synthetic accessibility. Part 1. Bioorg Med Chem Lett. 2009 Apr 15;19(8):2329-32. | |||||
REF 36 | Discovery of N-{1-[3-(3-oxo-2,3-dihydrobenzo[1,4]oxazin-4-yl)propyl]piperidin-4-yl}-2-phenylacetamide (Lu AE51090): an allosteric muscarinic M1 rec... J Med Chem. 2010 Sep 9;53(17):6386-97. | |||||
REF 37 | Discovery of 4-(5-methyloxazolo[4,5-b]pyridin-2-yl)-1,4-diazabicyclo[3.2.2]nonane (CP-810,123), a novel alpha 7 nicotinic acetylcholine receptor ag... J Med Chem. 2010 Feb 11;53(3):1222-37. | |||||
REF 38 | Cyclic guanidines as dual 5-HT5A/5-HT7 receptor ligands: structure-activity relationship elucidation. Bioorg Med Chem Lett. 2008 Jan 1;18(1):256-61. | |||||
REF 39 | The 5-HT3B subunit confers spontaneous channel opening and altered ligand properties of the 5-HT3 receptor. J Biol Chem. 2008 Mar 14;283(11):6826-31. | |||||
REF 40 | cis-4-(Piperazin-1-yl)-5,6,7a,8,9,10,11,11a-octahydrobenzofuro[2,3-h]quinazolin-2-amine (A-987306), a new histamine H4R antagonist that blocks pain... J Med Chem. 2008 Nov 27;51(22):7094-8. | |||||
REF 41 | Binding sites for bilobalide, diltiazem, ginkgolide, and picrotoxinin at the 5-HT3 receptor. Mol Pharmacol. 2011 Jul;80(1):183-90. | |||||
REF 42 | Synthesis and structure-affinity relationships of novel N-(1-ethyl-4-methylhexahydro-1,4-diazepin-6-yl)pyridine-3-carboxamides with potent serotoni... J Med Chem. 2003 Feb 27;46(5):702-15. | |||||
REF 43 | Novel and highly potent 5-HT3 receptor agonists based on a pyrroloquinoxaline structure. J Med Chem. 1997 Oct 24;40(22):3670-8. | |||||
REF 44 | Different efficacy of specific agonists at 5-HT3 receptor splice variants: the role of the extra six amino acid segment. Br J Pharmacol. 1998 Feb;123(4):661-6. | |||||
REF 45 | Discovery of N-[(3R,5R)-1-azabicyclo[3.2.1]oct-3-yl]furo[2,3-c]pyridine-5-carboxamide as an agonist of the alpha7 nicotinic acetylcholine receptor:... Bioorg Med Chem Lett. 2008 Jun 15;18(12):3611-5. | |||||
REF 46 | Novel, potent, and selective quinoxaline-based 5-HT(3) receptor ligands. 1. Further structure-activity relationships and pharmacological characteri... J Med Chem. 2009 Nov 12;52(21):6946-50. | |||||
REF 47 | Characterization of interaction of 3,4,5-trimethoxybenzoic acid 8-(diethylamino)octyl ester with Torpedo californica nicotinic acetylcholine receptor and 5-hydroxytryptamine3 receptor. J Pharmacol Exp Ther. 1999 Jul;290(1):129-35. | |||||
REF 48 | Arginine 246 of the pretransmembrane domain 1 region alters 2,2,2-trichloroethanol action in the 5-hydroxytryptamine3A receptor. J Pharmacol Exp Ther. 2008 Mar;324(3):1011-8. | |||||
REF 49 | Autoradiographic distribution of [3H]-(S)-zacopride-labelled 5-HT3 receptors in human brain. J Neurol Sci. 1996 Dec;144(1-2):119-27. | |||||
REF 50 | Evaluation of the pharmacological profile of ramosetron, a novel therapeutic agent for irritable bowel syndrome. J Pharmacol Sci. 2007 Jul;104(3):263-73. | |||||
REF 51 | Characterization of a human 5-hydroxytryptamine3 receptor type A (h5-HT3R-AS) subunit stably expressed in HEK 293 cells. Br J Pharmacol. 1996 Jul;118(5):1237-45. | |||||
REF 52 | Molecular cloning of human 5-hydroxytryptamine3 receptor: heterogeneity in distribution and function among species. Mol Pharmacol. 1995 Sep;48(3):407-16. |
If You Find Any Error in Data or Bug in Web Service, Please Kindly Report It to Dr. Zhou and Dr. Zhang.